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Information
| Code | BT0087 |
| Name | Biophysics in Biotechnology |
| Term | 2024-2025 Academic Year |
| Term | Fall |
| Duration (T+A) | 3-0 (T-A) (17 Week) |
| ECTS | 6 ECTS |
| National Credit | 3 National Credit |
| Teaching Language | Türkçe |
| Level | Yüksek Lisans Dersi |
| Type | Normal |
| Mode of study | Yüz Yüze Öğretim |
| Catalog Information Coordinator | |
| Course Instructor |
Prof. Dr. IŞIL ÖCAL
(A Group)
(Ins. in Charge)
|
Course Goal / Objective
Biophysics tries to formulate problems related to living organisms with physical concepts and to solve them with the laws of physics.
Course Content
Molecular structure of living systems, life molecules (proteins, carbohydrates, fats), biophysical evaluation of molecules, cell membranes, structure and function relationship, Transport and transports in cell membranes (Simple Diffusion, Active Transport, etc.), Channels and pumps that play a role in transport and transport (Ion Channels, Voltage Dependent Channels, ATPase Pump etc.), Bioenergetics (Free Energy and Energy Transfer in Living Things), Thermodynamics (Entropy, Enthalpy etc.), ATP and Chemical Energy Conduction, Mechanical, Kinetic and Heat Energy Conduction, Stable and Unstable State of the Cell,, Nernst Equilibrium Potential, Gibbs-Donnan Rule, Resting Dice and Action Potential
Course Precondition
The lesson has no prerequisites
Resources
Lecture notes (For Medical Faculty Students - İsmail Günay) Biophysics (Ferit Pehlivan) Biophysics (Gürbüz Çelebi)
Notes
Internet Search
Course Learning Outcomes
| Order | Course Learning Outcomes |
|---|---|
| LO01 | Comprehends the place and importance of Biophysics in living organism. |
| LO02 | Learns the physical methods and concepts used in the clarification of biophysics, biological processes and the solution of biological problems. |
| LO03 | Learns the molecules of life (Proteins, Carbohydrates and Fats) in the molecular structure of living systems and the biophysical evaluation of these molecules. |
| LO04 | Understands the electrical events in the structure and function relationship of cell membranes and the importance of these electrical events. |
| LO05 | learns the biophysical concepts involved in transport and transport (Simple Diffusion, Active Transport, etc.) in cell membranes, the physical laws and applications (Ion Channels, Voltage Dependent Channels, ATPase Pump, etc.) |
| LO06 | In terms of bioenergetics (Free Energy and Energy Transfer in Living Things), learns the biophysical mechanisms that play a role in the energy transferred and lost to the living organism (Thermodynamics (Entropy, Enthalpy, etc.) |
| LO07 | ATP and Chemical Energy Conduction, Mechanical, Kinetic and Heat Energy Conduction), learns how negative situations that occur in the Steady and Unstable State of the Cell affect the living organism. |
| LO08 | Learns the Nernst Equilibrium Potential and Gibbs-Donnan Rule, which exist and apply in the stable and unstable state of the cell membrane, the resting membrane and Action Potential that play a role in the resting and active state of the cell. |
Relation with Program Learning Outcome
| Order | Type | Program Learning Outcomes | Level |
|---|---|---|---|
| PLO01 | Bilgi - Kuramsal, Olgusal | Based on the undergraduate level qualifications, develops and deepens the knowledge in the same or different field at the level of expertise and analyzes and interprets them using statistical methods. | |
| PLO02 | Beceriler - Bilişsel, Uygulamalı | To identifiy the interdisciplinary interaction of the field and to solve use of the methods. | |
| PLO03 | Beceriler - Bilişsel, Uygulamalı | Interpret the knowledge gained in the field by integrating the information from different disciplines and creates new information | 5 |
| PLO04 | Yetkinlikler - Bağımsız Çalışabilme ve Sorumluluk Alabilme Yetkinliği | Develops new strategic approaches for solving complex problems that are encountered in applications related to the field. | 4 |
| PLO05 | Yetkinlikler - Öğrenme Yetkinliği | To teach the social, scientific, cultural and ethical values during the collection, interpretation, implementation and announcement of the data related to the field. | 3 |
| PLO06 | Yetkinlikler - İletişim ve Sosyal Yetkinlik | To solve the problems encountered in the field and cominicate by using research methods. | |
| PLO07 | Yetkinlikler - Alana Özgü Yetkinlik | To gain the ability to develop and deepen the knowledge in the field of biotechnology | 3 |
| PLO08 | Yetkinlikler - Alana Özgü Yetkinlik | Establishes functional interaction by using strategic decision-making processes in solving the problems encountered in the field. | |
| PLO09 | Yetkinlikler - Öğrenme Yetkinliği | Knows the ethical rules to be considered while obtaining biotechnological products. | 3 |
| PLO10 | Yetkinlikler - İletişim ve Sosyal Yetkinlik | He / she defends his / her original opinions in discussing the subjects in his / her field and establishes an effective communication showing his / her competence in the field. |
Week Plan
| Week | Topic | Preparation | Methods |
|---|---|---|---|
| 1 | Molecular Structure of Living Systems, | Research, Textbooks, Internet | Öğretim Yöntemleri: Anlatım, Soru-Cevap, Tartışma |
| 2 | Molecules of Life (Proteins, Carbohydrates and Fats), | Research, Textbooks, Internet | Öğretim Yöntemleri: Anlatım, Soru-Cevap, Beyin Fırtınası |
| 3 | Biophysical evaluation of molecules | Research, Textbooks, Internet | Öğretim Yöntemleri: Anlatım, Beyin Fırtınası, Soru-Cevap |
| 4 | Cell membranes; structure and function relationship | Research, Textbooks, Internet | Öğretim Yöntemleri: Soru-Cevap, Anlatım, Beyin Fırtınası |
| 5 | Transport and transports in cell membranes (Simple Diffusion, Active Transport etc.), | Research, Textbooks, Internet | Öğretim Yöntemleri: Anlatım, Soru-Cevap, Tartışma |
| 6 | Channels and pumps that play a role in Transport and Transport (Ion Channels, Voltage Dependent Channels, ATPase Pump etc.), | Research, Textbooks, Internet | Öğretim Yöntemleri: Anlatım, Soru-Cevap, Tartışma |
| 7 | Bioenergetics (Free Energy and Energy Transfer in Living Things), | Research, Textbooks, Internet | Öğretim Yöntemleri: Anlatım, Soru-Cevap, Tartışma |
| 8 | midterm | midterm | Ölçme Yöntemleri: Yazılı Sınav, Ödev, Proje / Tasarım |
| 9 | Thermodynamics (Entropy, Enthalpy etc.), | Research, Textbooks, Internet | Öğretim Yöntemleri: Anlatım, Soru-Cevap, Tartışma, Beyin Fırtınası |
| 10 | ATP and Chemical Energy Conduction, | Research, Textbooks, Internet | Öğretim Yöntemleri: Anlatım, Soru-Cevap, Tartışma |
| 11 | Mechanical, Kinetic and Heat Energy Conduction, | Research, Textbooks, Internet | Öğretim Yöntemleri: Anlatım, Soru-Cevap, Beyin Fırtınası |
| 12 | Steady and Unstable State of Cell, Nernst Equilibrium Potential, Gibbs-Donnan Rule, | Research, Textbooks, Internet | Öğretim Yöntemleri: Anlatım, Soru-Cevap, Tartışma |
| 13 | Resting Membrane and Action Potential | Research, Textbooks, Internet | Öğretim Yöntemleri: Anlatım, Soru-Cevap, Tartışma |
| 14 | Comparison of Membrane Potentials | Research, Textbooks, Internet | Öğretim Yöntemleri: Anlatım, Soru-Cevap, Tartışma |
| 15 | Cell's Equilibrium State | Research, Textbooks, Internet | Öğretim Yöntemleri: Alıştırma ve Uygulama, Anlatım |
| 16 | Semester Exam | Semester Exam | Ölçme Yöntemleri: Yazılı Sınav, Proje / Tasarım, Ödev |
| 17 | Final Exam | Notes of lectures, presentations | Ölçme Yöntemleri: Yazılı Sınav, Ödev |
Student Workload - ECTS
| Works | Number | Time (Hour) | Workload (Hour) |
|---|---|---|---|
| Course Related Works | |||
| Class Time (Exam weeks are excluded) | 14 | 3 | 42 |
| Out of Class Study (Preliminary Work, Practice) | 14 | 5 | 70 |
| Assesment Related Works | |||
| Homeworks, Projects, Others | 0 | 0 | 0 |
| Mid-term Exams (Written, Oral, etc.) | 1 | 15 | 15 |
| Final Exam | 1 | 30 | 30 |
| Total Workload (Hour) | 157 | ||
| Total Workload / 25 (h) | 6,28 | ||
| ECTS | 6 ECTS | ||