TÜRKÇE
ENGLISH
Information
| Code | BB0075 |
| Name | Population Genetics in Vegetables |
| Term | 2022-2023 Academic Year |
| Semester | . Semester |
| Duration (T+A) | 4-0 (T-A) (17 Week) |
| ECTS | 6 ECTS |
| National Credit | 4 National Credit |
| Teaching Language | Türkçe |
| Level | Doktora Dersi |
| Type | Normal |
| Mode of study | Yüz Yüze Öğretim |
| Catalog Information Coordinator |
Course Goal / Objective
The genetic structure of populations and how they change over time, evolution processes, basic mathematical tools, genetic drift, probabilities, genetic variations, selection, inbreeding depression, quantitative genetics are within the scope of the lesson.
Course Content
Genetic structure of populations, evolutionary phenomena, Introduction to Population Genetics, elements of population genetics, Genetic variation, Characterization of DNA sequence variations, Genetic drift, recombinations, Epistasis, Quantitative genetics, natural selection, G-matrix, QTL, Bayesian statistics
Course Precondition
No prerequisites
Resources
Population Genetics Wiley-Blackwell Matthew Hamilton Principles of Population Genetics Sinauer Associates Daniel L. Hartl, Andrew G. Clark Molecular population genetics Oxford University Press Hahn, Matthew William
Notes
Molecular population genetics Oxford University Press Hahn, Matthew William
Course Learning Outcomes
| Order | Course Learning Outcomes |
|---|---|
| LO01 | Understands the basic math and statistics behind population genetics |
| LO02 | Connects across ecology, genetics, statistics, and evolution with population genetics. |
| LO03 | Explain the principles of population genetics |
| LO04 | Associate population genetics to plant breeding |
Relation with Program Learning Outcome
| Order | Type | Program Learning Outcomes | Level |
|---|---|---|---|
| PLO01 | Bilgi - Kuramsal, Olgusal | To be able to develop, deepen, and to reach the original definitions that will bring innovation to the field with the original thinking and/or research of the current and advanced knowledge in his / her field based on his / her master's qualifications. | 4 |
| PLO02 | Bilgi - Kuramsal, Olgusal | Comprehends interdisciplinary interaction related to horticultural plants; achieves original results using information that requires expertise in analyzing, synthesizing and evaluating new and complex ideas | 3 |
| PLO03 | Bilgi - Kuramsal, Olgusal | Evaluates and uses new information in his / her field with a systematic approach | |
| PLO04 | Bilgi - Kuramsal, Olgusal | Can develop a new idea, method, design and/or application, or apply a known idea, method, design and/or application to a different field; can research, comprehend, design and apply an original topic | |
| PLO05 | Bilgi - Kuramsal, Olgusal | Make critical analysis, synthesis and evaluation of new and complex ideas | 4 |
| PLO06 | Bilgi - Kuramsal, Olgusal | To be able to use research methods in his / her field of study | |
| PLO07 | Bilgi - Kuramsal, Olgusal | To develop a new idea, method, design and/or application, or apply a well-known idea, method, design and/or application to a different field independently of the original work to contribute to the progress in the field | |
| PLO08 | Bilgi - Kuramsal, Olgusal | To be able to publish at least one scientific article in national and international refereed journals, or to produce or interpret an original work, to be able to extend the limits of knowledge in the field. | |
| PLO09 | Bilgi - Kuramsal, Olgusal | To Be able to lead in environments that require solving interdisciplinary problems, use problem solving skills in interdisciplinary studies | |
| PLO10 | Beceriler - Bilişsel, Uygulamalı | Develops new ideas and methods related to his / her field by using high-level mental processes such as creative and critical thinking, problem solving and decision making | 5 |
| PLO11 | Yetkinlikler - Bağımsız Çalışabilme ve Sorumluluk Alabilme Yetkinliği | In the national and international platforms, they present original views in the discussion of issues related to the field of local and foreign experts, they can defend these views, examine, develop and change the norms leading to social relations and these relations from a critical point of view; they can communicate effectively showing their competence in the field. | |
| PLO12 | Yetkinlikler - Öğrenme Yetkinliği | Specialized in special topics in his / her field | |
| PLO13 | Yetkinlikler - Öğrenme Yetkinliği | To be an information society in which the society lives, to be able to maintain it, to contribute to the solution of the social, scientific, cultural and ethical problems encountered. |
Week Plan
| Week | Topic | Preparation | Methods |
|---|---|---|---|
| 1 | Introduction to Population Genetics | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Anlatım, Soru-Cevap |
| 2 | Genetic variation | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Anlatım, Soru-Cevap |
| 3 | Characterization of DNA sequence variations | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Anlatım, Soru-Cevap |
| 4 | Genetic drift | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Anlatım, Soru-Cevap |
| 5 | Selection, modes of selection, one-locus selection models | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Anlatım, Soru-Cevap |
| 6 | Inbreeding depression and mating systems | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Anlatım, Soru-Cevap |
| 7 | Linkage and recombination | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Anlatım, Bireysel Çalışma, Soru-Cevap |
| 8 | Mid-term exam | Required readings from selected texts, as well as video and other multi-media learning materials | Ölçme Yöntemleri: Yazılı Sınav, Ödev |
| 9 | Multi-locus evolution | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Bireysel Çalışma, Anlatım, Soru-Cevap |
| 10 | Evolution of recombinations | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Soru-Cevap, Anlatım, Bireysel Çalışma |
| 11 | Epistasis | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Anlatım, Bireysel Çalışma |
| 12 | Quantitative genetics | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Soru-Cevap, Anlatım, Bireysel Çalışma |
| 13 | Measuring natural selection | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Bireysel Çalışma, Anlatım |
| 14 | Probabilities | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Anlatım |
| 15 | G-matris, QTL | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Bireysel Çalışma, Anlatım |
| 16 | Bayesian statistics | Required readings from selected texts, as well as video and other multi-media learning materials | Öğretim Yöntemleri: Anlatım |
| 17 | Final exam | Required readings from selected texts, as well as video and other multi-media learning materials | Ölçme Yöntemleri: Yazılı Sınav |
Student Workload - ECTS
| Works | Number | Time (Hour) | Workload (Hour) |
|---|---|---|---|
| Course Related Works | |||
| Class Time (Exam weeks are excluded) | 14 | 4 | 56 |
| Out of Class Study (Preliminary Work, Practice) | 14 | 4 | 56 |
| Assesment Related Works | |||
| Homeworks, Projects, Others | 0 | 0 | 0 |
| Mid-term Exams (Written, Oral, etc.) | 1 | 12 | 12 |
| Final Exam | 1 | 28 | 28 |
| Total Workload (Hour) | 152 | ||
| Total Workload / 25 (h) | 6,08 | ||
| ECTS | 6 ECTS | ||