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Information
| Code | HİS631 |
| Name | Computer Use and Image Analysis Techniques in Histology (Z) |
| Term | 2024-2025 Academic Year |
| Term | Fall and Spring |
| Duration (T+A) | 3-0 (T-A) (17 Week) |
| ECTS | 3 ECTS |
| National Credit | 3 National Credit |
| Teaching Language | Türkçe |
| Level | Doktora Dersi |
| Type | Normal |
| Mode of study | Yüz Yüze Öğretim |
| Catalog Information Coordinator | |
| Course Instructor |
Doç. Dr. YURDUN KUYUCU
(A Group)
(Ins. in Charge)
|
Course Goal / Objective
Obtaining images from various microscope types used in histology, analyzing and evaluating these images in computer.
Course Content
To learn the necessary information about the software used on the computer for histological imaging
Course Precondition
None
Resources
Ross Histology, Functional Histology
Notes
Ross Histology, Functional Histology
Course Learning Outcomes
| Order | Course Learning Outcomes |
|---|---|
| LO01 | 1- Knows the usage areas of light microscope, phase-contrast microscope, confocal microscope, electron microscope, atomic force microscope, stereo microscope. |
| LO02 | 2-Acquires images in Light microscope, phase-contrast microscope, confocal microscope, electron microscope, atomic force microscope. |
| LO03 | 3- Makes analysis and evaluation of images. |
| LO04 | 4-Has information about problems that can be encountered in technical steps. |
Relation with Program Learning Outcome
| Order | Type | Program Learning Outcomes | Level |
|---|---|---|---|
| PLO01 | Bilgi - Kuramsal, Olgusal | Have knowledge about structure and function of tissue and organ systems. | 5 |
| PLO02 | Bilgi - Kuramsal, Olgusal | Have knowledge about implantation biology and IVF techniques. | |
| PLO03 | Bilgi - Kuramsal, Olgusal | Gains knowledge of the normal development of tissue and organ systems, developmental disorders and mechanisms. | |
| PLO04 | Bilgi - Kuramsal, Olgusal | Knows advanced light and electron microscopic tissue preparation, histochemical, immunohistochemistry and cell culture techniques according to the study area. | 5 |
| PLO05 | Bilgi - Kuramsal, Olgusal | Has knowledge about the basic properties of stem cells. | |
| PLO06 | Bilgi - Kuramsal, Olgusal | Has advanced knowledge about technological tools, devices and tools used in histological studies | 5 |
| PLO07 | Bilgi - Kuramsal, Olgusal | Knows the importance of ethical rules and ethical principles. | |
| PLO08 | Bilgi - Kuramsal, Olgusal | Has knowledge about planning of experimental studies and statistical methods. | |
| PLO09 | Bilgi - Kuramsal, Olgusal | Prepares and examines the tissues using electron microscopic, immunohistochemistry and special staining techniques. | 5 |
| PLO10 | Bilgi - Kuramsal, Olgusal | Usestechnological tools, devices and equipment according to the level. | 5 |
| PLO11 | Bilgi - Kuramsal, Olgusal | Prepares experimental studies as a project. | |
| PLO12 | Bilgi - Kuramsal, Olgusal | Presents the results of research in scientific meetings and publishes them in refereed journals. | |
| PLO13 | Bilgi - Kuramsal, Olgusal | Makes critical analysis, synthesis and evaluation related to the field. | |
| PLO14 | Bilgi - Kuramsal, Olgusal | Carries out studies individually or as a team member and leads the necessary environments. | |
| PLO15 | Bilgi - Kuramsal, Olgusal | Bilimsel bir çalışmayı bağımsız olarak planlayıp, gerçekleştirerek istatistiksel analizlerini yapar. | |
| PLO16 | Beceriler - Bilişsel, Uygulamalı | Uses the principles of professional development and lifelong learning in their studies. | |
| PLO17 | Beceriler - Bilişsel, Uygulamalı | Uses critical thinking, decision making and evidence-based medicine applications in their research. | |
| PLO18 | Yetkinlikler - Bağımsız Çalışabilme ve Sorumluluk Alabilme Yetkinliği | By communicating effectively, discusses the issues related to the field and defends their views. | |
| PLO19 | Yetkinlikler - Öğrenme Yetkinliği | Works with relevant disciplines in the process of selecting, applying and interpreting appropriate methods for studies and establish functional communication. | 5 |
Week Plan
| Week | Topic | Preparation | Methods |
|---|---|---|---|
| 1 | General information about the microscope types used in histology | Self-study, reading recommended references | Öğretim Yöntemleri: Alıştırma ve Uygulama |
| 2 | Tissue Investigation in Light Microscope | Self-study | Öğretim Yöntemleri: Alıştırma ve Uygulama |
| 3 | Evaluation of images obtained in Light Microscope in computer | Self-study | Öğretim Yöntemleri: Alıştırma ve Uygulama |
| 4 | Tissue Analysis in Transmission Electron Microscope and evaluation of the obtained images in computer | Self-study | Öğretim Yöntemleri: Alıştırma ve Uygulama |
| 5 | Tissue Investigation in Scanning Electron Microscope | Self-study | Öğretim Yöntemleri: Alıştırma ve Uygulama |
| 6 | Evaluation of 3D images obtained in a scanning electron microscope in computer | Self-study | Öğretim Yöntemleri: Alıştırma ve Uygulama |
| 7 | Tissue investigation in phase-contrast microscope | Self-study | Öğretim Yöntemleri: Alıştırma ve Uygulama |
| 8 | Mid-Term Exam | Self-study | Ölçme Yöntemleri: Yazılı Sınav |
| 9 | Evaluation of images obtained in phase-contrast microscope in computer | Self-study | Öğretim Yöntemleri: Alıştırma ve Uygulama |
| 10 | Tissue Analysis in Stereo Microscope | Self-study | Öğretim Yöntemleri: Alıştırma ve Uygulama |
| 11 | Evaluation of images obtained in stereo microscope in computer | Self-study | Öğretim Yöntemleri: Alıştırma ve Uygulama |
| 12 | Tissue Examination in Confocal Microscope | Self-study | Öğretim Yöntemleri: Alıştırma ve Uygulama |
| 13 | Evaluation of images obtained in confocal microscope in computer | Self-study | Öğretim Yöntemleri: Alıştırma ve Uygulama |
| 14 | Tissue Investigation in Atomic Force Microscope | Self-study | Öğretim Yöntemleri: Alıştırma ve Uygulama |
| 15 | Evaluation of images obtained in atomic force microscope in computer | Self-study | Öğretim Yöntemleri: Alıştırma ve Uygulama |
| 16 | Term Exams | Self-study | Ölçme Yöntemleri: Yazılı Sınav |
| 17 | Term Exams | Self-study | Ölçme Yöntemleri: Yazılı Sınav |
Student Workload - ECTS
| Works | Number | Time (Hour) | Workload (Hour) |
|---|---|---|---|
| Course Related Works | |||
| Class Time (Exam weeks are excluded) | 14 | 3 | 42 |
| Out of Class Study (Preliminary Work, Practice) | 14 | 1 | 14 |
| Assesment Related Works | |||
| Homeworks, Projects, Others | 0 | 0 | 0 |
| Mid-term Exams (Written, Oral, etc.) | 1 | 9 | 9 |
| Final Exam | 1 | 10 | 10 |
| Total Workload (Hour) | 75 | ||
| Total Workload / 25 (h) | 3,00 | ||
| ECTS | 3 ECTS | ||