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Information
| Unit | INSTITUTE OF MEDICAL SCIENCES |
| BIOPHYSICS (MEDICINE) (MASTER) (WITH THESIS) | |
| Code | BFZ501 |
| Name | Biophysical Application-1 |
| Term | 2025-2026 Academic Year |
| Term | Fall and Spring |
| Duration (T+A) | 0-10 (T-A) (17 Week) |
| ECTS | 7 ECTS |
| National Credit | 5 National Credit |
| Teaching Language | Türkçe |
| Level | Yüksek Lisans Dersi |
| Type | Normal |
| Mode of study | Yüz Yüze Öğretim |
| Catalog Information Coordinator | Prof. Dr. IŞIL ÖCAL |
| Course Instructor |
Prof. Dr. AYKUT PELİT
(Bahar)
(A Group)
(Ins. in Charge)
Prof. Dr. FİGEN ÇİÇEK (Bahar) (B Group) (Ins. in Charge) Doç. Dr. ÇAĞIL COŞKUN (Bahar) (C Group) (Ins. in Charge) Prof. Dr. MUSTAFA EMRE (Bahar) (D Group) (Ins. in Charge) |
Course Goal / Objective
Aims at the use of biophysics application areas
Course Content
Application areas in biophysics -1
Course Precondition
Required to be taken every semester
Resources
Department of Biophysics Lecture Notes
Notes
internet
Course Learning Outcomes
| Order | Course Learning Outcomes |
|---|---|
| LO01 | Learns membrane structure and membrane models in practice |
| LO02 | Learns the formation of membrane potential with computer programs |
| LO03 | Calculates the ion equilibrium potential by simulation using the Nernst equilibrium equation |
| LO04 | Calculates the cell membrane steady state potential simulatically with the Goldman Hodgkin Katz equation |
| LO05 | Have the ability to apply the basic principles learned in biophysics to the living system. |
| LO06 | Muscle potential and EMG signals can be demonstrated practically |
| LO07 | Learns the physical basis of ECG with practical simulation |
| LO08 | Learn the characteristics, measurements and comparison of ECG, EMG and EEG |
Relation with Program Learning Outcome
| Order | Type | Program Learning Outcomes | Level |
|---|---|---|---|
| PLO01 | Bilgi - Kuramsal, Olgusal | Learns basic information about the field | 1 |
| PLO02 | Bilgi - Kuramsal, Olgusal | Sets up and works experimental setups in the laboratory | |
| PLO03 | Bilgi - Kuramsal, Olgusal | Prepares a project proposal on its own | 2 |
| PLO04 | Bilgi - Kuramsal, Olgusal | Plans an experimental study | |
| PLO05 | Bilgi - Kuramsal, Olgusal | Reports the research result | 2 |
| PLO06 | Bilgi - Kuramsal, Olgusal | Interpret the research findings | |
| PLO07 | Beceriler - Bilişsel, Uygulamalı | Has the analytical thinking mechanism related to the field, Reaches reliable information. Creates and writes a research project, works and researches based on ethical values. | 1 |
| PLO08 | Yetkinlikler - Bağımsız Çalışabilme ve Sorumluluk Alabilme Yetkinliği | She/he systematically transfers the theoretical knowledge she has researched to the audience. | 2 |
| PLO09 | Yetkinlikler - Öğrenme Yetkinliği | Have a scientific thinking systematic in relation to their profession. | |
| PLO10 | Bilgi - Kuramsal, Olgusal | Kendi başına bir proje önerisi hazırlayabilmek | 1 |
Week Plan
| Week | Topic | Preparation | Methods |
|---|---|---|---|
| 1 | Applied expression of cell potential | Reads the relevant chapter before class | Öğretim Yöntemleri: Anlatım |
| 2 | Applied expression of the membrane model with constant electric field | Reads the relevant chapter before class | Öğretim Yöntemleri: Anlatım |
| 3 | Simulation of Nernst and Hodgkin-Huxley-Katz Equations | Reads the relevant chapter before class | Öğretim Yöntemleri: Anlatım |
| 4 | Electrical equivalent circuit model of the membrane applied expression | Reads the relevant chapter before class | Öğretim Yöntemleri: Anlatım |
| 5 | Applied subthreshold potentials | Reads the relevant chapter before class | Öğretim Yöntemleri: Anlatım |
| 6 | Single fiber and nerve bundle action potentials applied expression | Reads the relevant chapter before class | Öğretim Yöntemleri: Anlatım |
| 7 | Extracellular and superficial potentials applied expression | Reads the relevant chapter before class | Öğretim Yöntemleri: Anlatım |
| 8 | Mid-Term Exam | Mid-Term Exam | Ölçme Yöntemleri: Yazılı Sınav |
| 9 | Applied expression of surface and volume conductor potentials | Reads the relevant chapter before class | Öğretim Yöntemleri: Anlatım |
| 10 | Homework - 1 | Reads the relevant chapter before class | Öğretim Yöntemleri: Anlatım |
| 11 | Electrocardiography applied expression | Reads the relevant chapter before class | Öğretim Yöntemleri: Anlatım |
| 12 | Electrocardiography and Electroencephalography Measurements Practical Explanation | Reads the relevant chapter before class | Öğretim Yöntemleri: Anlatım |
| 13 | Homework - 2 | Reads the relevant chapter before class | Öğretim Yöntemleri: Anlatım |
| 14 | Electromyoghraph | Reads the relevant chapter before class | Öğretim Yöntemleri: Anlatım |
| 15 | Homework - 3 | Reads the relevant chapter before class | Öğretim Yöntemleri: Anlatım |
| 16 | Term Exams | Term Exams | Ölçme Yöntemleri: Yazılı Sınav |
| 17 | Term Exams | Term Exams | Ölçme Yöntemleri: Sözlü Sınav |
Student Workload - ECTS
| Works | Number | Time (Hour) | Workload (Hour) |
|---|---|---|---|
| Course Related Works | |||
| Class Time (Exam weeks are excluded) | 8 | 10 | 80 |
| Out of Class Study (Preliminary Work, Practice) | 8 | 10 | 80 |
| Assesment Related Works | |||
| Homeworks, Projects, Others | 1 | 1 | 1 |
| Mid-term Exams (Written, Oral, etc.) | 1 | 1 | 1 |
| Final Exam | 1 | 1 | 1 |
| Total Workload (Hour) | 163 | ||
| Total Workload / 25 (h) | 6,52 | ||
| ECTS | 7 ECTS | ||